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Description : RING-HC-class E3 ligase
Gene families : OG_01_0003108 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g11480.1 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G69330 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c15_14420V3.1 | No alias | RING/U-box superfamily protein | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| CC | GO:0005779 | integral component of peroxisomal membrane | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0016559 | peroxisome fission | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016972 | thiol oxidase activity | IEP | HCCA |
| CC | GO:0031231 | intrinsic component of peroxisomal membrane | IEP | HCCA |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | HCCA |
| CC | GO:0031301 | integral component of organelle membrane | IEP | HCCA |
| BP | GO:0048285 | organelle fission | IEP | HCCA |
| MF | GO:0051499 | D-aminoacyl-tRNA deacylase activity | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027370 | Znf-RING_LisH | 9 | 42 |
| No external refs found! |