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  5. Mp1g12450.1

Mp1g12450.1


Description : component beta type-6 of 26S proteasome


Gene families : OG_01_0005284 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g12450.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT3G60820 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre26.g756797 No alias Protein degradation.26S proteasome.20S core... 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_16960V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c27_2640V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_09018.1 No alias component beta type-6 of 26S proteasome 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 29 224
No external refs found!