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  5. Mp1g14290.1

Mp1g14290.1


Description : component RPS16 of SSU proteome


Gene families : OG_01_0001151 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g14290.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G09990 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.28 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g573351 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.39 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_1350V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.41 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_22410V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.47 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_20630V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.46 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_21090V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.47 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_4180V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04605.1 No alias component uS9 of SSU proteome 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 12 144
No external refs found!