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AT1G55880


Description : Pyridoxal-5'-phosphate-dependent enzyme family protein


Gene families : OG_01_0004602 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55880
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Pp3c5_7330V3.1 No alias Pyridoxal-5\-phosphate-dependent enzyme family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0006520 cellular amino acid metabolic process ISS Interproscan
MF GO:0016829 lyase activity ISS Interproscan
BP GO:0048573 photoperiodism, flowering RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034196 acylglycerol transport IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0036503 ERAD pathway IEP HCCA
BP GO:0043157 response to cation stress IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043266 regulation of potassium ion transport IEP HCCA
BP GO:0043268 positive regulation of potassium ion transport IEP HCCA
BP GO:0043270 positive regulation of ion transport IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0051050 positive regulation of transport IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
MF GO:0070300 phosphatidic acid binding IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:1901965 endoplasmic reticulum to chloroplast transport IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
BP GO:1990052 ER to chloroplast lipid transport IEP HCCA
InterPro domains Description Start Stop
IPR001926 PLP-dep 46 388
PLAZA 3.0 Dicots AT1G55880