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  5. Mp1g24230.1

Mp1g24230.1


Description : alpha-class expansin


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g24230.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 No alias expansin A7 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28950 No alias expansin A6 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G37640 No alias Barwin-like endoglucanases superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40610 No alias expansin A8 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39270 No alias expansin A22 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22730.1 No alias alpha-class expansin 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22740.1 No alias alpha-class expansin 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g26350.1 No alias alpha-class expansin 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g18600.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g18610.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g09770.1 No alias alpha-class expansin 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g10160.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g24470.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g01930.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g20420.1 No alias alpha-class expansin 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g18860.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04242.1 No alias no annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008509 anion transmembrane transporter activity IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 142
IPR007117 Expansin_CBD 153 229
No external refs found!