Mp2g09860.1

Description : component KU80 of Ku70-Ku80 helicase complex

Gene families : OG_01_0004797 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004797_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp2g09860.1
Cluster	HCCA: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G48050	No alias	Ku80 family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_11100V3.1	No alias	Ku80 family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEA	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
BP	GO:0000723	telomere maintenance	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004529	exodeoxyribonuclease activity	IEP	HCCA
MF	GO:0004536	deoxyribonuclease activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004806	triglyceride lipase activity	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008297	single-stranded DNA exodeoxyribonuclease activity	IEP	HCCA
MF	GO:0008409	5'-3' exonuclease activity	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0030151	molybdenum ion binding	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
MF	GO:0035312	5'-3' exodeoxyribonuclease activity	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0045145	single-stranded DNA 5'-3' exodeoxyribonuclease activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014893	Ku_PK_bind	570	686
IPR005161	Ku_N	9	153
IPR005160	Ku_C	454	522
IPR006164	Ku70/Ku80_beta-barrel_dom	228	431

External Links

No external refs found!

Mp2g09860.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation