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  5. Mp3g03930.1

Mp3g03930.1


Description : alpha-class expansin


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g03930.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT2G28950 No alias expansin A6 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22740.1 No alias alpha-class expansin 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g26350.1 No alias alpha-class expansin 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g18600.1 No alias alpha-class expansin 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g10160.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g01930.1 No alias alpha-class expansin 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g18860.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 75 156
IPR007117 Expansin_CBD 167 243
No external refs found!