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  5. Mp3g06860.1

Mp3g06860.1


Description : RNA polymerase-IV-positioning factor (SHH). transcription factor (SAWADEE)


Gene families : OG_01_0009774 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g06860.1
Cluster HCCA: Cluster_139


Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 122 249
No external refs found!