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  5. Mp3g10960.1

Mp3g10960.1


Description : subunit SSL2/XPB of multifunctional TFIIh complex. component SSL2/XPB of TFIIh basal transcription factor complex


Gene families : OG_01_0004538 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004538_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g10960.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Pp3c6_13890V3.1 No alias homolog of Xeroderma pigmentosum complementation group B 2 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019211 phosphatase activator activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0090730 Las1 complex IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR032438 ERCC3_RAD25_C 470 718
IPR032830 XPB/Ssl2_N 72 196
IPR006935 Helicase/UvrB_N 288 444
No external refs found!