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  5. Mp3g15000.1

Mp3g15000.1


Description : component RPS15 of SSU proteome


Gene families : OG_01_0000618 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g15000.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT1G04270 No alias cytosolic ribosomal protein S15 0.36 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G09500 No alias Ribosomal protein S19 family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G09510 No alias Ribosomal protein S19 family protein 0.24 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre08.g360900 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.28 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_9180V3.1 No alias Ribosomal protein S19 family protein 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_19770V3.1 No alias Ribosomal protein S19 family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_23700V3.1 No alias Ribosomal protein S19 family protein 0.24 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_15250V3.1 No alias Ribosomal protein S19 family protein 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11194.2 No alias component uS19 of SSU proteome 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005534 galactose binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0048029 monosaccharide binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 109 194
No external refs found!