AT1G62940


Description : acyl-CoA synthetase 5


Gene families : OG_01_0008662 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008662_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G62940
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Mp1g11670.1 No alias acyl-CoA synthetase (ACS5) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_37980V3.1 No alias acyl-CoA synthetase 5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IDA Interproscan
MF GO:0004467 long-chain fatty acid-CoA ligase activity IDA Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0010584 pollen exine formation IMP Interproscan
BP GO:0010584 pollen exine formation RCA Interproscan
MF GO:0016207 4-coumarate-CoA ligase activity ISS Interproscan
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IDA Interproscan
BP GO:0046949 fatty-acyl-CoA biosynthetic process IDA Interproscan
BP GO:0080110 sporopollenin biosynthetic process IMP Interproscan
BP GO:0080110 sporopollenin biosynthetic process TAS Interproscan
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005788 endoplasmic reticulum lumen IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009820 alkaloid metabolic process IEP HCCA
BP GO:0009821 alkaloid biosynthetic process IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
MF GO:0015271 outward rectifier potassium channel activity IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016621 cinnamoyl-CoA reductase activity IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030638 polyketide metabolic process IEP HCCA
BP GO:0030639 polyketide biosynthetic process IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0035445 borate transmembrane transport IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0046713 borate transport IEP HCCA
MF GO:0046715 active borate transmembrane transporter activity IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP HCCA
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP HCCA
BP GO:0048658 anther wall tapetum development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0051791 medium-chain fatty acid metabolic process IEP HCCA
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP HCCA
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP HCCA
MF GO:0090439 tetraketide alpha-pyrone synthase activity IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
BP GO:1900150 regulation of defense response to fungus IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 36 442
IPR025110 AMP-bd_C 451 526
PLAZA 3.0 Dicots AT1G62940