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Description : component RPL22 of LSU proteome component
Gene families : OG_01_0000811 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000811_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp4g02920.1 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G05560 | No alias | Ribosomal L22e protein family | 0.51 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G27770 | No alias | Ribosomal L22e protein family | 0.37 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Cre07.g357850 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.41 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c11_630V3.1 | No alias | Ribosomal L22e protein family | 0.29 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c11_680V3.1 | No alias | Ribosomal L22e protein family | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c16_17710V3.1 | No alias | Ribosomal L22e protein family | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c1_120V3.1 | No alias | Ribosomal L22e protein family | 0.48 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c2_28500V3.1 | No alias | Ribosomal L22e protein family | 0.52 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c2_28510V3.1 | No alias | Ribosomal L22e protein family | 0.52 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c6_5370V3.1 | No alias | Ribosomal L22e protein family | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c7_27030V3.1 | No alias | Ribosomal L22e protein family | 0.14 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_00776.1 | No alias | component eL22 of LSU proteome component | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002671 | Ribosomal_L22e | 18 | 127 |
| No external refs found! |