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  5. Mp4g13440.1

Mp4g13440.1


Description : histone (H4)


Gene families : OG_01_0000034 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g13440.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT1G07820 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28740 No alias histone H4 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45930 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46320 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G53730 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59690 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59970 No alias Histone superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g570000 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708200 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710500 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g711800 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713500 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714000 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714600 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22450.1 No alias histone (H4) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22460.1 No alias histone (H4) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22470.1 No alias histone (H4) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_5310V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_22190V3.1 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_22340V3.1 No alias histone H4 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_22160V3.1 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_22150V3.1 No alias histone H4 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP HCCA
BP GO:0015986 ATP synthesis coupled proton transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!