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  5. Mp4g15800.1

Mp4g15800.1


Description : component RPL5 of LSU proteome component


Gene families : OG_01_0001910 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g15800.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT3G25520 No alias ribosomal protein L5 0.41 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39740 No alias ribosomal protein L5 B 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g621450 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_6420V3.1 No alias ribosomal protein L5 B 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_7160V3.1 No alias ribosomal protein L5 B 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_31540V3.1 No alias ribosomal protein L5 B 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_25660V3.1 No alias ribosomal protein L5 B 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01830.1 No alias component uL18 of LSU proteome component 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004427 inorganic diphosphatase activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 ion transmembrane transport IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0098655 cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR025607 Rbsml_L5e/L18P_C 191 280
IPR005485 Rbsml_L5_euk/L18_arc 14 175
No external refs found!