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  5. Mp4g23910.1

Mp4g23910.1


Description : component RPL27 of LSU proteome component


Gene families : OG_01_0002044 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g23910.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G32220 No alias Ribosomal L27e protein family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22230 No alias Ribosomal L27e protein family 0.36 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G15000 No alias Ribosomal L27e protein family 0.45 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g701650 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_4610V3.1 No alias Ribosomal L27e protein family 0.41 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_21640V3.1 No alias Ribosomal L27e protein family 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_20290V3.1 No alias Ribosomal L27e protein family 0.27 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_24410V3.1 No alias Ribosomal L27e protein family 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009555 pollen development IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 52 135
No external refs found!