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  5. Mp4g23990.1

Mp4g23990.1


Description : component RPL10 of LSU proteome component


Gene families : OG_01_0001499 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g23990.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT1G14320 No alias Ribosomal protein L16p/L10e family protein 0.4 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26910 No alias Ribosomal protein L16p/L10e family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_4130V3.1 No alias Ribosomal protein L16p/L10e family protein 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_3170V3.1 No alias Ribosomal protein L16p/L10e family protein 0.31 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_29600V3.1 No alias Ribosomal protein L16p/L10e family protein 0.42 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_22400V3.1 No alias Ribosomal protein L16p/L10e family protein 0.27 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02434.1 No alias component uL16 of LSU proteome component 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004427 inorganic diphosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 12 166
No external refs found!