1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp5g02830.1

Mp5g02830.1


Description : component LSm6 of U6-associated LSm accessory ribonucleoprotein complex


Gene families : OG_01_0003325 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003325_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g02830.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT3G59810 No alias Small nuclear ribonucleoprotein family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g151750 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_1280V3.1 No alias Small nuclear ribonucleoprotein family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_1090V3.1 No alias Small nuclear ribonucleoprotein family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070469 respirasome IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 22 86
No external refs found!