- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : F-box family protein
Gene families : OG_01_0003472 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003472_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G67390 | |
| Cluster | HCCA: Cluster_108 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003825 | alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006349 | regulation of gene expression by genetic imprinting | IEP | HCCA |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009685 | gibberellin metabolic process | IEP | HCCA |
| BP | GO:0009686 | gibberellin biosynthetic process | IEP | HCCA |
| BP | GO:0009960 | endosperm development | IEP | HCCA |
| BP | GO:0010023 | proanthocyanidin biosynthetic process | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016101 | diterpenoid metabolic process | IEP | HCCA |
| BP | GO:0016102 | diterpenoid biosynthetic process | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
| MF | GO:0016707 | gibberellin 3-beta-dioxygenase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0022603 | regulation of anatomical structure morphogenesis | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0043076 | megasporocyte nucleus | IEP | HCCA |
| CC | GO:0043078 | polar nucleus | IEP | HCCA |
| MF | GO:0045544 | gibberellin 20-oxidase activity | IEP | HCCA |
| BP | GO:0048317 | seed morphogenesis | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0071514 | genetic imprinting | IEP | HCCA |
| BP | GO:0080113 | regulation of seed growth | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2000014 | regulation of endosperm development | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001810 | F-box_dom | 42 | 80 |
| PLAZA 3.0 Dicots | AT1G67390 |