AT1G67630


Description : DNA polymerase alpha 2


Gene families : OG_01_0008835 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008835_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G67630
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Cre01.g017450 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g03190.1 No alias replication fork tethering component POLA2 of DNA... 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination RCA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0006260 DNA replication RCA Interproscan
BP GO:0006261 DNA-dependent DNA replication RCA Interproscan
BP GO:0006270 DNA replication initiation RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0008283 cell population proliferation RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0016458 obsolete gene silencing RCA Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0051726 regulation of cell cycle RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003688 DNA replication origin binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004422 hypoxanthine phosphoribosyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005640 nuclear outer membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006166 purine ribonucleoside salvage IEP HCCA
BP GO:0006168 adenine salvage IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006178 guanine salvage IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006268 DNA unwinding involved in DNA replication IEP HCCA
BP GO:0006271 DNA strand elongation involved in DNA replication IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009163 nucleoside biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009292 genetic transfer IEP HCCA
BP GO:0009294 DNA mediated transformation IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010338 leaf formation IEP HCCA
BP GO:0010358 leaf shaping IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0016572 histone phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022616 DNA strand elongation IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030894 replisome IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031056 regulation of histone modification IEP HCCA
BP GO:0031057 negative regulation of histone modification IEP HCCA
BP GO:0031058 positive regulation of histone modification IEP HCCA
BP GO:0031060 regulation of histone methylation IEP HCCA
BP GO:0031062 positive regulation of histone methylation IEP HCCA
BP GO:0031401 positive regulation of protein modification process IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0031567 mitotic cell size control checkpoint signaling IEP HCCA
CC GO:0031965 nuclear membrane IEP HCCA
BP GO:0032196 transposition IEP HCCA
BP GO:0032197 transposition, RNA-mediated IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032263 GMP salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0032270 positive regulation of cellular protein metabolic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP HCCA
BP GO:0035065 regulation of histone acetylation IEP HCCA
BP GO:0035067 negative regulation of histone acetylation IEP HCCA
MF GO:0035173 histone kinase activity IEP HCCA
MF GO:0035174 histone serine kinase activity IEP HCCA
MF GO:0035175 histone kinase activity (H3-S10 specific) IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042278 purine nucleoside metabolic process IEP HCCA
BP GO:0042451 purine nucleoside biosynthetic process IEP HCCA
BP GO:0042455 ribonucleoside biosynthetic process IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043096 purine nucleobase salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0043174 nucleoside salvage IEP HCCA
CC GO:0043601 nuclear replisome IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0044764 multi-organism cellular process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0045177 apical part of cell IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046083 adenine metabolic process IEP HCCA
BP GO:0046084 adenine biosynthetic process IEP HCCA
BP GO:0046098 guanine metabolic process IEP HCCA
BP GO:0046099 guanine biosynthetic process IEP HCCA
BP GO:0046100 hypoxanthine metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0046128 purine ribonucleoside metabolic process IEP HCCA
BP GO:0046129 purine ribonucleoside biosynthetic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048826 cotyledon morphogenesis IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051570 regulation of histone H3-K9 methylation IEP HCCA
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP HCCA
BP GO:0051704 multi-organism process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
MF GO:0070182 DNA polymerase binding IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090239 regulation of histone H4 acetylation IEP HCCA
BP GO:0090241 negative regulation of histone H4 acetylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
MF GO:0106130 purine phosphoribosyltransferase activity IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901983 regulation of protein acetylation IEP HCCA
BP GO:1901984 negative regulation of protein acetylation IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP HCCA
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP HCCA
InterPro domains Description Start Stop
IPR007185 DNA_pol_a/d/e_bsu 361 571
PLAZA 3.0 Dicots AT1G67630