Coexpression cluster: Cluster_166 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006260 DNA replication 7.63% (9/118) 3.02 2e-06 0.000396
GO:0005730 nucleolus 8.47% (10/118) 3.02 0.0 0.000402
GO:0043232 intracellular non-membrane-bounded organelle 11.86% (14/118) 2.24 2e-06 0.00046
GO:0043228 non-membrane-bounded organelle 11.86% (14/118) 2.24 2e-06 0.00046
GO:0006261 DNA-dependent DNA replication 6.78% (8/118) 3.19 3e-06 0.0005
GO:0018205 peptidyl-lysine modification 7.63% (9/118) 2.63 1.6e-05 0.002349
GO:0006139 nucleobase-containing compound metabolic process 21.19% (25/118) 1.29 2.3e-05 0.002488
GO:0016570 histone modification 7.63% (9/118) 2.59 2e-05 0.002528
GO:0008283 cell population proliferation 5.08% (6/118) 3.13 6.8e-05 0.004212
GO:0018022 peptidyl-lysine methylation 5.93% (7/118) 2.82 6.4e-05 0.00425
GO:0032259 methylation 8.47% (10/118) 2.21 6.3e-05 0.004552
GO:0043414 macromolecule methylation 8.47% (10/118) 2.21 6.3e-05 0.004552
GO:0034968 histone lysine methylation 5.93% (7/118) 2.83 6.2e-05 0.005377
GO:0018193 peptidyl-amino acid modification 7.63% (9/118) 2.4 5.8e-05 0.005532
GO:0034641 cellular nitrogen compound metabolic process 22.88% (27/118) 1.09 0.000107 0.005769
GO:0046483 heterocycle metabolic process 22.03% (26/118) 1.12 0.000106 0.006091
GO:0000166 nucleotide binding 10.17% (12/118) 1.74 0.000267 0.008879
GO:1901265 nucleoside phosphate binding 10.17% (12/118) 1.74 0.000267 0.008879
GO:0043226 organelle 76.27% (90/118) 0.33 0.000264 0.009496
GO:0043229 intracellular organelle 76.27% (90/118) 0.33 0.000259 0.009737
GO:0006479 protein methylation 5.93% (7/118) 2.51 0.000243 0.010006
GO:0008213 protein alkylation 5.93% (7/118) 2.51 0.000243 0.010006
GO:0051726 regulation of cell cycle 5.93% (7/118) 2.5 0.000259 0.010171
GO:0097159 organic cyclic compound binding 22.03% (26/118) 1.05 0.000235 0.010683
GO:1901363 heterocyclic compound binding 22.03% (26/118) 1.06 0.000212 0.010771
GO:0016571 histone methylation 5.93% (7/118) 2.53 0.000228 0.010954
GO:0034645 cellular macromolecule biosynthetic process 12.71% (15/118) 1.46 0.000365 0.011674
GO:0006807 nitrogen compound metabolic process 31.36% (37/118) 0.76 0.000504 0.015538
GO:0022402 cell cycle process 7.63% (9/118) 1.96 0.000554 0.015946
GO:0006725 cellular aromatic compound metabolic process 22.03% (26/118) 0.97 0.000549 0.016356
GO:0043227 membrane-bounded organelle 74.58% (88/118) 0.31 0.000673 0.017615
GO:0006268 DNA unwinding involved in DNA replication 1.69% (2/118) 5.7 0.000637 0.017762
GO:0043231 intracellular membrane-bounded organelle 74.58% (88/118) 0.31 0.000662 0.017871
GO:0072655 establishment of protein localization to mitochondrion 3.39% (4/118) 3.16 0.00108 0.020743
GO:0070585 protein localization to mitochondrion 3.39% (4/118) 3.16 0.00108 0.020743
GO:0006304 DNA modification 4.24% (5/118) 2.75 0.000918 0.020876
GO:0044728 DNA methylation or demethylation 4.24% (5/118) 2.76 0.000895 0.020894
GO:0061647 histone H3-K9 modification 4.24% (5/118) 2.71 0.001042 0.020935
GO:0051567 histone H3-K9 methylation 4.24% (5/118) 2.71 0.001042 0.020935
GO:0006306 DNA methylation 4.24% (5/118) 2.78 0.000849 0.020967
GO:0006305 DNA alkylation 4.24% (5/118) 2.78 0.000849 0.020967
GO:0006626 protein targeting to mitochondrion 3.39% (4/118) 3.19 0.001006 0.021195
GO:0044267 cellular protein metabolic process 15.25% (18/118) 1.15 0.001132 0.021268
GO:1901360 organic cyclic compound metabolic process 22.03% (26/118) 0.9 0.001183 0.021296
GO:0036094 small molecule binding 11.02% (13/118) 1.46 0.000893 0.021422
GO:0005634 nucleus 47.46% (56/118) 0.5 0.001166 0.021426
GO:0140097 catalytic activity, acting on DNA 3.39% (4/118) 3.1 0.001241 0.021445
GO:0032508 DNA duplex unwinding 1.69% (2/118) 5.17 0.001365 0.02145
GO:0009117 nucleotide metabolic process 7.63% (9/118) 1.84 0.000971 0.021503
GO:0043603 cellular amide metabolic process 6.78% (8/118) 1.94 0.001226 0.021621
GO:1901293 nucleoside phosphate biosynthetic process 5.08% (6/118) 2.32 0.001329 0.02167
GO:0009059 macromolecule biosynthetic process 12.71% (15/118) 1.27 0.001358 0.021722
GO:0006753 nucleoside phosphate metabolic process 7.63% (9/118) 1.83 0.001006 0.021722
GO:0022613 ribonucleoprotein complex biogenesis 3.39% (4/118) 3.08 0.001327 0.022054
GO:0009165 nucleotide biosynthetic process 5.08% (6/118) 2.33 0.001305 0.022115
GO:0032392 DNA geometric change 1.69% (2/118) 5.07 0.001589 0.02451
GO:1901564 organonitrogen compound metabolic process 24.58% (29/118) 0.78 0.002177 0.032429
GO:0043170 macromolecule metabolic process 27.12% (32/118) 0.72 0.002223 0.032559
GO:0090304 nucleic acid metabolic process 14.41% (17/118) 1.11 0.002155 0.032659
GO:0055086 nucleobase-containing small molecule metabolic process 7.63% (9/118) 1.66 0.002297 0.033072
GO:0006275 regulation of DNA replication 3.39% (4/118) 2.81 0.00264 0.035096
GO:0006220 pyrimidine nucleotide metabolic process 3.39% (4/118) 2.81 0.00264 0.035096
GO:0006221 pyrimidine nucleotide biosynthetic process 3.39% (4/118) 2.81 0.00264 0.035096
GO:0006270 DNA replication initiation 2.54% (3/118) 3.44 0.002728 0.035716
GO:0009218 pyrimidine ribonucleotide metabolic process 3.39% (4/118) 2.82 0.00257 0.035812
GO:0009220 pyrimidine ribonucleotide biosynthetic process 3.39% (4/118) 2.82 0.00257 0.035812
GO:0000724 double-strand break repair via homologous recombination 2.54% (3/118) 3.41 0.002849 0.036204
GO:0000725 recombinational repair 2.54% (3/118) 3.41 0.002849 0.036204
GO:0009560 embryo sac egg cell differentiation 3.39% (4/118) 2.76 0.002935 0.036757
GO:0019693 ribose phosphate metabolic process 5.93% (7/118) 1.88 0.003116 0.037392
GO:0009259 ribonucleotide metabolic process 5.93% (7/118) 1.88 0.003116 0.037392
GO:0005488 binding 32.2% (38/118) 0.61 0.003192 0.037774
GO:0072528 pyrimidine-containing compound biosynthetic process 3.39% (4/118) 2.74 0.003091 0.038153
GO:0006839 mitochondrial transport 3.39% (4/118) 2.65 0.003862 0.045089
GO:0009909 regulation of flower development 5.08% (6/118) 1.98 0.004301 0.045313
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine 0.85% (1/118) 7.87 0.004267 0.045513
GO:0000107 imidazoleglycerol-phosphate synthase activity 0.85% (1/118) 7.87 0.004267 0.045513
GO:0004070 aspartate carbamoyltransferase activity 0.85% (1/118) 7.87 0.004267 0.045513
GO:0042273 ribosomal large subunit biogenesis 0.85% (1/118) 7.87 0.004267 0.045513
GO:0033984 indole-3-glycerol-phosphate lyase activity 0.85% (1/118) 7.87 0.004267 0.045513
GO:0010485 H4 histone acetyltransferase activity 0.85% (1/118) 7.87 0.004267 0.045513
GO:0034654 nucleobase-containing compound biosynthetic process 6.78% (8/118) 1.63 0.00452 0.047052
GO:2000026 regulation of multicellular organismal development 5.93% (7/118) 1.77 0.004643 0.047754
GO:0072527 pyrimidine-containing compound metabolic process 3.39% (4/118) 2.62 0.004243 0.048875
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_5 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_16 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_23 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_30 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_40 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_49 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_50 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_52 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_74 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_83 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_84 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_112 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_126 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_128 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_138 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_142 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_148 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_155 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_159 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_167 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_183 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_184 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_189 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_190 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_211 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_223 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_228 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_246 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_253 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_254 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_264 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_268 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_9 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_23 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.039 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_59 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_66 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_120 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_128 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_5 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_6 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_22 0.039 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_54 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_69 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_73 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_80 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_88 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_104 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_127 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_128 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_129 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_135 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_159 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_172 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_175 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_14 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_52 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_53 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_58 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_124 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_130 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_132 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_163 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_174 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_191 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_219 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_265 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_266 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_273 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_292 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_99 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_110 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_167 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_168 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (118) (download table)

InterPro Domains

GO Terms

Family Terms