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  5. AT1G67750

AT1G67750


Description : Pectate lyase family protein


Gene families : OG_01_0000806 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G67750
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT5G63180 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_16990V3.1 No alias Pectate lyase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0030570 pectate lyase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0006949 syncytium formation IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
MF GO:0010328 auxin influx transmembrane transporter activity IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016805 dipeptidase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032268 regulation of cellular protein metabolic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048826 cotyledon morphogenesis IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
InterPro domains Description Start Stop
IPR002022 Pec_lyase 141 325
PLAZA 3.0 Dicots AT1G67750