Mp6g02810.1


Description : component RPS3a of SSU proteome


Gene families : OG_01_0000966 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000966_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g02810.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT3G04840 No alias Ribosomal protein S3Ae 0.4 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G34670 No alias Ribosomal protein S3Ae 0.34 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g568650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_17260V3.1 No alias Ribosomal protein S3Ae 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_18590V3.1 No alias Ribosomal protein S3Ae 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_2090V3.1 No alias Ribosomal protein S3Ae 0.36 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_21510V3.1 No alias Ribosomal protein S3Ae 0.37 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_18300V3.1 No alias Ribosomal protein S3Ae 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_14160V3.1 No alias Ribosomal protein S3Ae 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07031.1 No alias component eS1 of SSU proteome 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!