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  5. Mp6g04810.1

Mp6g04810.1


Description : E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana (sp|q8le94|ring3_arath : 91.7)


Gene families : OG_01_0001143 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g04810.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT4G00335 No alias RING-H2 finger B1A 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G23450 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre08.g371400 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_11700V3.1 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0098599 palmitoyl hydrolase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 136 177
No external refs found!