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  5. Mp6g05620.1

Mp6g05620.1


Description : component RPL35 of LSU proteome component


Gene families : OG_01_0001104 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g05620.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT2G39390 No alias Ribosomal L29 family protein 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G09500 No alias Ribosomal L29 family protein 0.4 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G55170 No alias Ribosomal L29 family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02610 No alias Ribosomal L29 family protein 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.44 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g07170.1 No alias component RPL35 of LSU proteome component 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_5200V3.1 No alias Ribosomal L29 family protein 0.46 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_13720V3.1 No alias Ribosomal L29 family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_2800V3.1 No alias Ribosomal L29 family protein 0.39 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_30730V3.1 No alias Ribosomal L29 family protein 0.52 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08404.1 0.26No alias component uL29 of LSU proteome component 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!