Mp6g10500.1

Description : component RPS11 of SSU proteome

Gene families : OG_01_0001240 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp6g10500.1
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
AT3G48930	No alias	Nucleic acid-binding, OB-fold-like protein	0.37	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G30800	No alias	Nucleic acid-binding, OB-fold-like protein	0.13	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G23740	No alias	ribosomal protein S11-beta	0.3	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g514500	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.34	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_9600V3.1	No alias	Nucleic acid-binding, OB-fold-like protein	0.25	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_27980V3.1	No alias	Nucleic acid-binding, OB-fold-like protein	0.37	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_13690V3.1	No alias	Nucleic acid-binding, OB-fold-like protein	0.31	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s116_30V3.1	No alias	Nucleic acid-binding, OB-fold-like protein	0.26	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15066.1	No alias	component uS17 of SSU proteome	0.34	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
MF	GO:0008121	ubiquinol-cytochrome-c reductase activity	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	HCCA
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032440	Ribosomal_S11_N	4	72
IPR000266	Ribosomal_S17/S11	74	142

External Links

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Mp6g10500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation