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  5. AT1G06630

AT1G06630


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0000021 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G06630
Cluster HCCA: Cluster_131


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP HCCA
MF GO:0000030 mannosyltransferase activity IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004845 uracil phosphoribosyltransferase activity IEP HCCA
MF GO:0004856 xylulokinase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
BP GO:0005997 xylulose metabolic process IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0006892 post-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006896 Golgi to vacuole transport IEP HCCA
BP GO:0007041 lysosomal transport IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0008333 endosome to lysosome transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009745 sucrose mediated signaling IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010222 stem vascular tissue pattern formation IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
MF GO:0010283 pinoresinol reductase activity IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010942 positive regulation of cell death IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
BP GO:0036503 ERAD pathway IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0043068 positive regulation of programmed cell death IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 16 49
PLAZA 3.0 Dicots AT1G06630