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  5. Mp6g20140.1

Mp6g20140.1


Description : no hits & (original description: none)


Gene families : OG_01_0003480 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g20140.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre03.g152450 No alias No description available 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_10960V3.1 No alias SMAD/FHA domain-containing protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08426.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003856 3-dehydroquinate synthase activity IEP HCCA
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004555 alpha,alpha-trehalase activity IEP HCCA
MF GO:0004843 thiol-dependent deubiquitinase IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015927 trehalase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000253 FHA_dom 305 372
No external refs found!