AT1G71440

Description : tubulin folding cofactor E / Pfifferling (PFI)

Gene families : OG_01_0005272 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005272_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G71440
Cluster	HCCA: Cluster_109

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007021	tubulin complex assembly	ISS	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000811	GINS complex	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	HCCA
MF	GO:0004040	amidase activity	IEP	HCCA
MF	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006626	protein targeting to mitochondrion	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0006839	mitochondrial transport	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007231	osmosensory signaling pathway	IEP	HCCA
BP	GO:0007610	behavior	IEP	HCCA
BP	GO:0007638	mechanosensory behavior	IEP	HCCA
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	HCCA
BP	GO:0009853	photorespiration	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
BP	GO:0010064	embryonic shoot morphogenesis	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
MF	GO:0015020	glucuronosyltransferase activity	IEP	HCCA
MF	GO:0015562	efflux transmembrane transporter activity	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016632	oxidoreductase activity, acting on the CH-CH group of donors, cytochrome as acceptor	IEP	HCCA
MF	GO:0016633	galactonolactone dehydrogenase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016842	amidine-lyase activity	IEP	HCCA
MF	GO:0016882	cyclo-ligase activity	IEP	HCCA
MF	GO:0019107	myristoyltransferase activity	IEP	HCCA
BP	GO:0019852	L-ascorbic acid metabolic process	IEP	HCCA
BP	GO:0019853	L-ascorbic acid biosynthetic process	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
MF	GO:0030272	5-formyltetrahydrofolate cyclo-ligase activity	IEP	HCCA
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	HCCA
BP	GO:0031048	heterochromatin assembly by small RNA	IEP	HCCA
BP	GO:0031050	dsRNA processing	IEP	HCCA
CC	GO:0031261	DNA replication preinitiation complex	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0033500	carbohydrate homeostasis	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0046467	membrane lipid biosynthetic process	IEP	HCCA
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048598	embryonic morphogenesis	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0070585	protein localization to mitochondrion	IEP	HCCA
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	HCCA
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	HCCA
MF	GO:0080049	L-gulono-1,4-lactone dehydrogenase activity	IEP	HCCA
BP	GO:1901334	lactone metabolic process	IEP	HCCA
BP	GO:1901336	lactone biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000938	CAP-Gly_domain	12	79

External Links

PLAZA 3.0 Dicots	AT1G71440

AT1G71440

Expression Profile

Co-expression Networks

Functional Annotation