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  5. Pp3c10_8090V3.1

Pp3c10_8090V3.1


Description : Ribosomal protein L31e family protein


Gene families : OG_01_0001305 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_8090V3.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT2G19740 No alias Ribosomal protein L31e family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G26230 No alias Ribosomal protein L31e family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56710 No alias Ribosomal protein L31e family protein 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g489153 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_7550V3.1 No alias Ribosomal protein L31e family protein 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01743.1 No alias component eL31 of LSU proteome component 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 11 92
No external refs found!