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  5. Pp3c10_9060V3.1

Pp3c10_9060V3.1


Description : SWITCH/sucrose nonfermenting 3C


Gene families : OG_01_0000917 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_9060V3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT2G47620 No alias SWITCH/sucrose nonfermenting 3A 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G34430 No alias DNA-binding family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g15610.1 No alias component BAF255/170 of chromatin remodeling complex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_6830V3.1 No alias DNA-binding family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_24980V3.1 No alias switch subunit 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!