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  5. Pp3c11_12600V3.1

Pp3c11_12600V3.1


Description : Coatomer, alpha subunit


Gene families : OG_01_0003689 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_12600V3.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT1G62020 No alias Coatomer, alpha subunit 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G21390 No alias Coatomer, alpha subunit 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g565850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04821.1 No alias subunit alpha of coat protein complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!