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  5. Pp3c11_23580V3.1

Pp3c11_23580V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001944 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_23580V3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT3G19590 No alias Transducin/WD40 repeat-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g09140.1 No alias BUB3 spindle assembly checkpoint protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!