Coexpression cluster: Cluster_224 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044815 DNA packaging complex 4.55% (4/88) 5.67 1e-06 3.8e-05
GO:0032993 protein-DNA complex 4.55% (4/88) 5.67 1e-06 3.8e-05
GO:0000786 nucleosome 4.55% (4/88) 5.72 1e-06 9.7e-05
GO:0032991 protein-containing complex 6.82% (6/88) 3.33 3.1e-05 0.000765
GO:0016071 mRNA metabolic process 2.27% (2/88) 6.36 0.000258 0.004264
GO:0006397 mRNA processing 2.27% (2/88) 6.36 0.000258 0.004264
GO:0031123 RNA 3'-end processing 1.14% (1/88) 8.53 0.002711 0.019172
GO:0006378 mRNA polyadenylation 1.14% (1/88) 8.53 0.002711 0.019172
GO:0005849 mRNA cleavage factor complex 1.14% (1/88) 8.53 0.002711 0.019172
GO:0043631 RNA polyadenylation 1.14% (1/88) 8.53 0.002711 0.019172
GO:0031124 mRNA 3'-end processing 1.14% (1/88) 8.53 0.002711 0.019172
GO:0005575 cellular_component 7.95% (7/88) 1.81 0.003921 0.025877
GO:0003677 DNA binding 4.55% (4/88) 2.94 0.001879 0.026568
GO:0006396 RNA processing 2.27% (2/88) 4.32 0.004551 0.028156
GO:0051920 peroxiredoxin activity 1.14% (1/88) 7.53 0.005415 0.028216
GO:0003729 mRNA binding 1.14% (1/88) 7.53 0.005415 0.028216
GO:0003676 nucleic acid binding 5.68% (5/88) 2.19 0.004907 0.028577
GO:1901363 heterocyclic compound binding 9.09% (8/88) 1.75 0.002657 0.029225
GO:0097159 organic cyclic compound binding 9.09% (8/88) 1.75 0.002657 0.029225
GO:0005488 binding 10.23% (9/88) 1.37 0.008189 0.035248
GO:0000398 mRNA splicing, via spliceosome 1.14% (1/88) 6.94 0.008112 0.036503
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.14% (1/88) 6.94 0.008112 0.036503
GO:0000375 RNA splicing, via transesterification reactions 1.14% (1/88) 6.94 0.008112 0.036503
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_25 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_31 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_58 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_110 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_213 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_217 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_44 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_52 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_90 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_137 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_1 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_5 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_6 0.058 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_20 0.052 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_67 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_87 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_107 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_144 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_4 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_52 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_68 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_134 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_145 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_164 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_165 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_181 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_185 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_196 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_219 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_246 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_273 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_300 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_302 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_41 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_88 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_130 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (88) (download table)

InterPro Domains

GO Terms

Family Terms