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  5. Pp3c11_5840V3.1

Pp3c11_5840V3.1


Description : Ribosomal protein L22p/L17e family protein


Gene families : OG_01_0001549 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001549_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pp3c11_5840V3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AT1G27400 No alias Ribosomal protein L22p/L17e family protein 0.39 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67430 No alias Ribosomal protein L22p/L17e family protein 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g568900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.53 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g10230.1 No alias component RPL17 of LSU proteome component 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00364.1 No alias component uL22 of LSU proteome component 0.27 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 47 182
No external refs found!