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  5. AT1G76920

AT1G76920


Description : F-box family protein


Gene families : OG_01_0017455 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G76920
Cluster HCCA: Cluster_76


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
BP GO:0006869 lipid transport RCA Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000098 sulfur amino acid catabolic process IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0001678 cellular glucose homeostasis IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004520 endodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
MF GO:0004563 beta-N-acetylhexosaminidase activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005769 early endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006266 DNA ligation IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006294 nucleotide-excision repair, preincision complex assembly IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007006 mitochondrial membrane organization IEP HCCA
BP GO:0007007 inner mitochondrial membrane organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007041 lysosomal transport IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007602 phototransduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008333 endosome to lysosome transport IEP HCCA
MF GO:0008660 1-aminocyclopropane-1-carboxylate deaminase activity IEP HCCA
BP GO:0009093 cysteine catabolic process IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009585 red, far-red light phototransduction IEP HCCA
BP GO:0009638 phototropism IEP HCCA
BP GO:0009663 plasmodesma organization IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010044 response to aluminum ion IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010213 non-photoreactive DNA repair IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010562 positive regulation of phosphorus metabolic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010922 positive regulation of phosphatase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015774 polysaccharide transport IEP HCCA
MF GO:0015929 hexosaminidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP HCCA
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0017108 5'-flap endonuclease activity IEP HCCA
MF GO:0019148 D-cysteine desulfhydrase activity IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019447 D-cysteine catabolic process IEP HCCA
BP GO:0019478 D-amino acid catabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033500 carbohydrate homeostasis IEP HCCA
BP GO:0034330 cell junction organization IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
BP GO:0035306 positive regulation of dephosphorylation IEP HCCA
BP GO:0035510 DNA dealkylation IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042593 glucose homeostasis IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0045039 protein insertion into mitochondrial inner membrane IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045165 cell fate commitment IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045216 cell-cell junction organization IEP HCCA
BP GO:0045937 positive regulation of phosphate metabolic process IEP HCCA
BP GO:0046416 D-amino acid metabolic process IEP HCCA
BP GO:0046438 D-cysteine metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0047560 3-dehydrosphinganine reductase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0048256 flap endonuclease activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051204 protein insertion into mitochondrial membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051345 positive regulation of hydrolase activity IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0070988 demethylation IEP HCCA
BP GO:0071215 cellular response to abscisic acid stimulus IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071326 cellular response to monosaccharide stimulus IEP HCCA
BP GO:0071331 cellular response to hexose stimulus IEP HCCA
BP GO:0071333 cellular response to glucose stimulus IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0080111 DNA demethylation IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP HCCA
BP GO:0097306 cellular response to alcohol IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901968 regulation of polynucleotide 3'-phosphatase activity IEP HCCA
BP GO:1901969 positive regulation of polynucleotide 3'-phosphatase activity IEP HCCA
BP GO:1901971 regulation of DNA-5-methylcytosine glycosylase activity IEP HCCA
BP GO:1901972 positive regulation of DNA-5-methylcytosine glycosylase activity IEP HCCA
BP GO:1902544 regulation of DNA N-glycosylase activity IEP HCCA
BP GO:1902546 positive regulation of DNA N-glycosylase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 45
IPR011498 Kelch_2 257 306
PLAZA 3.0 Dicots AT1G76920