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  5. Pp3c12_23330V3.1

Pp3c12_23330V3.1


Description : TBP-associated factor 5


Gene families : OG_01_0007086 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_23330V3.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT5G25150 No alias TBP-associated factor 5 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g526950 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g14840.1 No alias component TAF5 of SAGA transcription co-activator... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!