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  5. Pp3c12_24320V3.1

Pp3c12_24320V3.1


Description : Protein of unknown function (DUF1399)


Gene families : OG_01_0000239 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_24320V3.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT1G56230 No alias Protein of unknown function (DUF1399) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g10720.1 No alias Glycine-rich domain-containing protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g11870.1 No alias Glycine-rich domain-containing protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_14700V3.1 No alias Protein of unknown function (DUF1399) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_29600V3.1 No alias Protein of unknown function (DUF1399) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR009836 GRDP-like 24 100
IPR009836 GRDP-like 96 217
No external refs found!