AT1G07410


Description : RAB GTPase homolog A2B


Gene families : OG_01_0000279 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G07410
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Cre03.g189250 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_10280V3.1 No alias RAB GTPase homolog A2B 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006457 protein folding RCA Interproscan
BP GO:0009408 response to heat RCA Interproscan
CC GO:0009504 cell plate IDA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0004845 uracil phosphoribosyltransferase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP HCCA
CC GO:0031307 integral component of mitochondrial outer membrane IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032592 integral component of mitochondrial membrane IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
BP GO:0044703 multi-organism reproductive process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
CC GO:0098573 intrinsic component of mitochondrial membrane IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
PLAZA 3.0 Dicots AT1G07410