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  5. Pp3c13_2440V3.1

Pp3c13_2440V3.1


Description : EF hand calcium-binding protein family


Gene families : OG_01_0000095 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_2440V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Mp1g22210.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_5720V3.1 No alias EF hand calcium-binding protein family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_1770V3.1 No alias EF hand calcium-binding protein family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 35 94
IPR002048 EF_hand_dom 118 180
No external refs found!