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  5. AT2G01740

AT2G01740


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0016248 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G01740
Cluster HCCA: Cluster_252


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000374 Group III intron splicing IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005838 proteasome regulatory particle IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007006 mitochondrial membrane organization IEP HCCA
BP GO:0007007 inner mitochondrial membrane organization IEP HCCA
BP GO:0007143 female meiotic nuclear division IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0010018 far-red light signaling pathway IEP HCCA
MF GO:0010314 phosphatidylinositol-5-phosphate binding IEP HCCA
BP GO:0010496 intercellular transport IEP HCCA
BP GO:0016233 telomere capping IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 histone phosphorylation IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone-lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034046 poly(G) binding IEP HCCA
BP GO:0034249 negative regulation of cellular amide metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
BP GO:0042753 positive regulation of circadian rhythm IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
BP GO:0042775 mitochondrial ATP synthesis coupled electron transport IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0045039 protein insertion into mitochondrial inner membrane IEP HCCA
BP GO:0045947 negative regulation of translational initiation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051204 protein insertion into mitochondrial membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
MF GO:0070717 poly-purine tract binding IEP HCCA
BP GO:0071490 cellular response to far red light IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090057 root radial pattern formation IEP HCCA
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090351 seedling development IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 86 115
IPR002885 Pentatricopeptide_repeat 298 330
IPR002885 Pentatricopeptide_repeat 161 210
IPR002885 Pentatricopeptide_repeat 232 278
IPR002885 Pentatricopeptide_repeat 402 450
IPR002885 Pentatricopeptide_repeat 473 518
IPR002885 Pentatricopeptide_repeat 336 385
IPR002885 Pentatricopeptide_repeat 130 157
PLAZA 3.0 Dicots AT2G01740