AT2G02660

Description : F-box associated ubiquitination effector family protein

Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G02660
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AT1G23037	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30790	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30920	No alias	F-box family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30925	No alias	phospholipase Cs	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31090	No alias	F-box family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32420	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32660	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33010	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46840	No alias	F-box family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47765	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47810	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50870	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50880	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53360	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53370	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60370	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61060	No alias	F-box family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67130	No alias	F-box family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02890	No alias	F-box family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16220	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16810	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G19630	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G23160	No alias	F-box family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G31470	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G32470	No alias	F-box associated ubiquitination effector family protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40910	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52320	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22791	No alias	F-box family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38810	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42430	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220	No alias	F-box family protein	0.1	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52620	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007059	chromosome segregation	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007131	reciprocal meiotic recombination	RCA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	RCA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035825	homologous recombination	None	Extended
BP	GO:0042138	meiotic DNA double-strand break formation	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045132	meiotic chromosome segregation	RCA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0061982	meiosis I cell cycle process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
BP	GO:0098813	nuclear chromosome segregation	None	Extended
BP	GO:0140527	reciprocal homologous recombination	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005673	transcription factor TFIIE complex	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0010219	regulation of vernalization response	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
BP	GO:0040034	regulation of development, heterochronic	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048442	sepal development	IEP	HCCA
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	HCCA
BP	GO:0048509	regulation of meristem development	IEP	HCCA
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	HCCA
BP	GO:0048832	specification of plant organ number	IEP	HCCA
BP	GO:0048833	specification of floral organ number	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013187	F-box-assoc_dom_typ3	200	344

External Links

PLAZA 3.0 Dicots	AT2G02660

AT2G02660

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation