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  5. Pp3c17_18440V3.1

Pp3c17_18440V3.1


Description : MIF4G domain-containing protein / MA3 domain-containing protein


Gene families : OG_01_0001109 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_18440V3.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
Cre17.g696250 No alias Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_20220V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_20340V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_18640V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03518.1 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 245 469
IPR003891 Initiation_fac_eIF4g_MI 689 797
No external refs found!