1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c17_6540V3.1

Pp3c17_6540V3.1


Description : translocon at the inner envelope membrane of chloroplasts 110


Gene families : OG_01_0004906 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004906_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_6540V3.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G06950 No alias translocon at the inner envelope membrane of chloroplasts 110 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g452450 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g27360.1 No alias component Tic110 of inner envelope TIC translocation system 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_05795.1 No alias component Tic110 of inner envelope TIC translocation system 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!