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  5. Pp3c18_21360V3.1

Pp3c18_21360V3.1


Description : vacuolar protein sorting 45


Gene families : OG_01_0007182 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_21360V3.1
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT1G77140 No alias vacuolar protein sorting 45 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre07.g333950 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!