1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c18_6360V3.1

Pp3c18_6360V3.1


Description : 4-coumarate:CoA ligase 3


Gene families : OG_01_0001527 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001527_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_6360V3.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT1G51680 No alias 4-coumarate:CoA ligase 1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G21240 No alias 4-coumarate:CoA ligase 2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 87 491
IPR025110 AMP-bd_C 500 575
No external refs found!