AT2G05160

Description : CCCH-type zinc fingerfamily protein with RNA-binding domain

Gene families : OG_01_0008340 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008340_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G05160
Cluster	HCCA: Cluster_218

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0004743	pyruvate kinase activity	IEP	HCCA
BP	GO:0006360	transcription by RNA polymerase I	IEP	HCCA
BP	GO:0009830	cell wall modification involved in abscission	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0044277	cell wall disassembly	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025605	OST-HTH/LOTUS_dom	211	290
IPR000504	RRM_dom	328	380

External Links

PLAZA 3.0 Dicots	AT2G05160