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  5. Pp3c19_15590V3.1

Pp3c19_15590V3.1


Description : protein containing PDZ domain, a K-box domain, and a TPR region


Gene families : OG_01_0005119 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c19_15590V3.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT1G55480 No alias protein containing PDZ domain, a K-box domain, and a TPR region 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre01.g031100 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g23930.1 No alias MET1 protein involved in PS-II assembly 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11351.1 No alias protein involved in PS-II assembly (MET1) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!