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  5. Pp3c1_1000V3.1

Pp3c1_1000V3.1


Description : plastid transcriptionally active 6


Gene families : OG_01_0008111 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_1000V3.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G21600 No alias plastid transcriptionally active 6 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g10030.1 No alias PAP8/TAC6 cofactor of plastid-encoded RNA polymerase 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!