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  5. Pp3c1_13120V3.1

Pp3c1_13120V3.1


Description : Protein of unknown function (DUF59)


Gene families : OG_01_0003355 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_13120V3.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Cre11.g479700 No alias Coenzyme metabolism.iron-sulfur cluster assembly... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002744 MIP18-like 38 111
No external refs found!