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  5. Pp3c1_28770V3.1

Pp3c1_28770V3.1


Description : Nucleic acid-binding, OB-fold-like protein


Gene families : OG_01_0001614 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_28770V3.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cre12.g510450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g15160.1 No alias component RPS28 of SSU proteome 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_13300V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_6000V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_27040V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000289 Ribosomal_S28e 5 64
No external refs found!